covid 19 image classification

It is calculated between each feature for all classes, as in Eq. For each decision tree, node importance is calculated using Gini importance, Eq. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2. Performance analysis of neural networks for classification of medical images with wavelets as a feature extractor. For example, Lambin et al.7 proposed an efficient approach called Radiomics to extract medical image features. Wu, Y.-H. etal. Figure6 shows a comparison between our FO-MPA approach and other CNN architectures. Also, WOA algorithm showed good results in all measures, unlike dataset 1, which can conclude that no algorithm can solve all kinds of problems. Med. Eng. Kong, Y., Deng, Y. A combination of fractional-order and marine predators algorithm (FO-MPA) is considered an integration among a robust tool in mathematics named fractional-order calculus (FO). Furthermore, using few hundreds of images to build then train Inception is considered challenging because deep neural networks need large images numbers to work efficiently and produce efficient features. 4 and Table4 list these results for all algorithms. Besides, all algorithms showed the same statistical stability in STD measure, except for HHO and HGSO. On the second dataset, dataset 2 (Fig. 2 (left). Feature selection based on gaussian mixture model clustering for the classification of pulmonary nodules based on computed tomography. Decaf: A deep convolutional activation feature for generic visual recognition. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 19 (2015). The announcement confirmed that from May 8, following Japan's Golden Week holiday period, COVID-19 will be officially downgraded to Class 5, putting the virus on the same classification level as seasonal influenza. Furthermore, the proposed GRAY+GRAY_HE+GRAY_CLAHE image representation was evaluated on two different datasets, SARS-CoV-2 CT-Scan and New_Data_CoV2, where it was found to be superior to RGB . COVID-19 Chest X -Ray Image Classification with Neural Network Currently we are suffering from COVID-19, and the situation is very serious. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. Inception architecture is described in Fig. ADS Bisong, E. Building Machine Learning and Deep Learning Models on Google Cloud Platform (Springer, Berlin, 2019). the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Szegedy, C. et al. While no feature selection was applied to select best features or to reduce model complexity. Syst. Nature 503, 535538 (2013). They are distributed among people, bats, mice, birds, livestock, and other animals1,2. & Cmert, Z. Image Underst. My education and internships have equipped me with strong technical skills in Python, deep learning models, machine learning classification, text classification, and more. In this paper, filters of size 2, besides a stride of 2 and \(2 \times 2\) as Max pool, were adopted. In some cases (as exists in this work), the dataset is limited, so it is not sufficient for building & training a CNN. It can be concluded that FS methods have proven their advantages in different medical imaging applications19. (20), \(FAD=0.2\), and W is a binary solution (0 or 1) that corresponded to random solutions. Vis. IEEE Trans. Comput. Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. According to the formula10, the initial locations of the prey and predator can be defined as below: where the Elite matrix refers to the fittest predators. Technol. (15) can be reformulated to meet the special case of GL definition of Eq. (1): where \(O_k\) and \(E_k\) refer to the actual and the expected feature value, respectively. Chollet, F. Xception: Deep learning with depthwise separable convolutions. Test the proposed Inception Fractional-order Marine Predators Algorithm (IFM) approach on two publicity available datasets contain a number of positive negative chest X-ray scan images of COVID-19. Multimedia Tools Appl. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of CO VID-19. COVID-19 image classification using deep features and fractional-order marine predators algorithm. Also, all other works do not give further statistics about their models complexity and the number of featurset produced, unlike, our approach which extracts the most informative features (130 and 86 features for dataset 1 and dataset 2) that imply faster computation time and, accordingly, lower resource consumption. used VGG16 to classify Covid-19 and achieved good results with an accuracy of 86% [ 22 ]. One of these datasets has both clinical and image data. I. S. of Medical Radiology. The survey asked participants to broadly classify the findings of each chest CT into one of the four RSNA COVID-19 imaging categories, then select which imaging features led to their categorization. . The test accuracy obtained for the model was 98%. In14, the authors proposed an FS method based on a convolutional neural network (CNN) to detect pneumonia from lung X-ray images. Finally, the sum of the features importance value on each tree is calculated then divided by the total number of trees as in Eq. For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. Table3 shows the numerical results of the feature selection phase for both datasets. org (2015). Johnson, D.S., Johnson, D. L.L., Elavarasan, P. & Karunanithi, A. ), such as \(5\times 5\), \(3 \times 3\), \(1 \times 1\). HIGHLIGHTS who: Qinghua Xie and colleagues from the Te Afliated Changsha Central Hospital, Hengyang Medical School, University of South China, Changsha, Hunan, China have published the Article: Automatic Segmentation and Classification for Antinuclear Antibody Images Based on Deep Learning, in the Journal: Computational Intelligence and Neuroscience of 14/08/2022 what: Terefore, the authors . Future Gener. This means we can use pre-trained model weights, leveraging all of the time and data it took for training the convolutional part, and just remove the FCN layer. In addition, up to our knowledge, MPA has not applied to any real applications yet. SharifRazavian, A., Azizpour, H., Sullivan, J. 92, 103662. https://doi.org/10.1016/j.engappai.2020.103662 (2020). Med. 43, 302 (2019). The data was collected mainly from retrospective cohorts of pediatric patients from Guangzhou Women and Childrens medical center. COVID-19 is the most transmissible disease, caused by the SARS-CoV-2 virus that severely infects the lungs and the upper respiratory tract of the human body.This virus badly affected the lives and wellness of millions of people worldwide and spread widely. Kharrat, A. Yousri, D. & Mirjalili, S. Fractional-order cuckoo search algorithm for parameter identification of the fractional-order chaotic, chaotic with noise and hyper-chaotic financial systems. Image Anal. & SHAH, S. S.H. The diagnostic evaluation of convolutional neural network (cnn) for the assessment of chest x-ray of patients infected with covid-19. The proposed IFM approach is summarized as follows: Extracting deep features from Inception, where about 51 K features were extracted. Therefore, a feature selection technique can be applied to perform this task by removing those irrelevant features. Average of the consuming time and the number of selected features in both datasets. Moreover, we design a weighted supervised loss that assigns higher weight for . arXiv preprint arXiv:1704.04861 (2017). Havaei, M. et al. Comput. & Baby, C.J. Emphysema medical image classification using fuzzy decision tree with fuzzy particle swarm optimization clustering. 95, 5167 (2016). The algorithm combines the assessment of image quality, digital image processing and deep learning for segmentation of the lung tissues and their classification. Harikumar et al.18 proposed an FS method based on wavelets to classify normality or abnormality of different types of medical images, such as CT, MRI, ultrasound, and mammographic images. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 770778 (2016). 0.9875 and 0.9961 under binary and multi class classifications respectively. Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan: PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. It achieves a Dice score of 0.9923 for segmentation, and classification accuracies of 0. To survey the hypothesis accuracy of the models. & Pouladian, M. Feature selection for contour-based tuberculosis detection from chest x-ray images. Coronavirus disease (Covid-19) is an infectious disease that attacks the respiratory area caused by the severe acute . The MPA starts with the initialization phase and then passing by other three phases with respect to the rational velocity among the prey and the predator. Appl. In the current work, the values of k, and \(\zeta\) are set to 2, and 2, respectively. So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. Phys. Stage 2: The prey/predator in this stage begin exploiting the best location that detects for their foods. The memory properties of Fc calculus makes it applicable to the fields that required non-locality and memory effect. Med. Google Scholar. Objective: Lung image classification-assisted diagnosis has a large application market. Chowdhury, M.E. etal. All data used in this paper is available online in the repository, [https://github.com/ieee8023/covid-chestxray-dataset], [https://stanfordmlgroup.github.io/projects/chexnet], [https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia] and [https://www.sirm.org/en/category/articles/covid-19-database/]. Currently, we witness the severe spread of the pandemic of the new Corona virus, COVID-19, which causes dangerous symptoms to humans and animals, its complications may lead to death. First: prey motion based on FC the motion of the prey of Eq. Stage 1: After the initialization, the exploration phase is implemented to discover the search space. Med. Etymology. Pool layers are used mainly to reduce the inputs size, which accelerates the computation as well. We do not present a usable clinical tool for COVID-19 diagnosis, but offer a new, efficient approach to optimize deep learning-based architectures for medical image classification purposes. Eng. (5). Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. Comput. The Softmax activation function is used for this purpose because the output should be binary (positive COVID-19 negative COVID-19). et al. Inf. The following stage was to apply Delta variants. Efficient classification of white blood cell leukemia with improved swarm optimization of deep features. Ge, X.-Y. There are three main parameters for pooling, Filter size, Stride, and Max pool. Dhanachandra and Chanu35 proposed a hybrid method of dynamic PSO and fuzzy c-means to segment two types of medical images, MRI and synthetic images. Abbas, A., Abdelsamea, M.M. & Gaber, M.M. Classification of covid-19 in chest x-ray images using detrac deep convolutional neural network. It is obvious that such a combination between deep features and a feature selection algorithm can be efficient in several image classification tasks. One of the drawbacks of pre-trained models, such as Inception, is that its architecture required large memory requirements as well as storage capacity (92 M.B), which makes deployment exhausting and a tiresome task. In Dataset 2, FO-MPA also is reported as the highest classification accuracy with the best and mean measures followed by the BPSO. The authors declare no competing interests. A features extraction method using the Histogram of Oriented Gradients (HOG) algorithm and the Linear Support Vector Machine (SVM), K-Nearest Neighbor (KNN) Medium and Decision Tree (DT) Coarse Tree classification methods can be used in the diagnosis of Covid-19 disease. The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. Hashim, F. A., Houssein, E. H., Mabrouk, M. S., Al-Atabany, W. & Mirjalili, S. Henry gas solubility optimization: a novel physics-based algorithm. However, WOA showed the worst performances in these measures; which means that if it is run in the same conditions several times, the same results will be obtained. Cancer 48, 441446 (2012). Deep residual learning for image recognition. The model was developed using Keras library47 with Tensorflow backend48. Table2 shows some samples from two datasets. Negative COVID-19 images were collected from another Chest X-ray Kaggle published dataset43. CAS The symbol \(r\in [0,1]\) represents a random number. 2020-09-21 . Scientific Reports Volume 10, Issue 1, Pages - Publisher. Imaging 35, 144157 (2015). Accordingly, the FC is an efficient tool for enhancing the performance of the meta-heuristic algorithms by considering the memory perspective during updating the solutions. Therefore, reducing the size of the feature from about 51 K as extracted by deep neural networks (Inception) to be 128.5 and 86 in dataset 1 and dataset 2, respectively, after applying FO-MPA algorithm while increasing the general performance can be considered as a good achievement as a machine learning goal. In such a case, in order to get the advantage of the power of CNN and also, transfer learning can be applied to minimize the computational costs21,22. So some statistical operations have been added to exclude irrelevant and noisy features, and by making it more computationally efficient and stable, they are summarized as follows: Chi-square is applied to remove the features which have a high correlation values by computing the dependence between them. The results are the best achieved on these datasets when compared to a set of recent feature selection algorithms. Then, applying the FO-MPA to select the relevant features from the images. Our proposed approach is called Inception Fractional-order Marine Predators Algorithm (IFM), where we combine Inception (I) with Fractional-order Marine Predators Algorithm (FO-MPA). In Medical Imaging 2020: Computer-Aided Diagnosis, vol. MathSciNet }, \end{aligned}$$, $$\begin{aligned} D^{\delta }[U(t)]=\frac{1}{T^\delta }\sum _{k=0}^{m} \frac{(-1)^k\Gamma (\delta +1)U(t-kT)}{\Gamma (k+1)\Gamma (\delta -k+1)} \end{aligned}$$, $$\begin{aligned} D^1[U(t)]=U(t+1)-U(t) \end{aligned}$$, $$\begin{aligned} U=Lower+rand_1\times (Upper - Lower ) \end{aligned}$$, $$\begin{aligned} Elite=\left[ \begin{array}{cccc} U_{11}^1&{}U_{12}^1&{}\ldots &{}U_{1d}^1\\ U_{21}^1&{}U_{22}^1&{}\ldots &{}U_{2d}^1\\ \ldots &{}\ldots &{}\ldots &{}\ldots \\ U_{n1}^1&{}U_{n2}^1&{}\ldots &{}U_{nd}^1\\ \end{array}\right] , \, U=\left[ \begin{array}{cccc} U_{11}&{}U_{12}&{}\ldots &{}U_{1d}\\ U_{21}&{}U_{22}&{}\ldots &{}U_{2d}\\ \ldots &{}\ldots &{}\ldots &{}\ldots \\ U_{n1}&{}U_{n2}&{}\ldots &{}U_{nd}\\ \end{array}\right] , \, \end{aligned}$$, $$\begin{aligned} S_i&= {} R_B \bigotimes (Elite_i-R_B\bigotimes U_i), i=1,2,\ldots ,n \end{aligned}$$, $$\begin{aligned} U_i&= {} U_i+P.R\bigotimes S_i \end{aligned}$$, \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\), $$\begin{aligned} S_i&= {} R_L \bigotimes (Elite_i-R_L\bigotimes U_i), i=1,2,\ldots ,n/2 \end{aligned}$$, $$\begin{aligned} S_i&= {} R_B \bigotimes (R_B \bigotimes Elite_i- U_i), i=1,2,\ldots ,n/2 \end{aligned}$$, $$\begin{aligned} U_i&= {} Elite_i+P.CF\bigotimes S_i,\, CF= \left( 1-\frac{t}{t_{max}} \right) ^{\left(2\frac{t}{t_{max}}\right) } \end{aligned}$$, $$\begin{aligned} S_i&= {} R_L \bigotimes (R_L \bigotimes Elite_i- U_i), i=1,2,\ldots ,n \end{aligned}$$, $$\begin{aligned} U_i&= {} Elite_i+P.CF\bigotimes S_i,\, CF= \left( 1-\frac{t}{t_{max}}\right) ^{\left(2\frac{t}{t_{max}} \right) } \end{aligned}$$, $$\begin{aligned} U_i=\left\{ \begin{array}{ll} U_i+CF [U_{min}+R \bigotimes (U_{max}-U_{min})]\bigotimes W &{} r_5 < FAD \\ U_i+[FAD(1-r)+r](U_{r1}-U_{r2}) &{} r_5 > FAD\\ \end{array}\right. It is important to detect positive cases early to prevent further spread of the outbreak. In this paper, we apply a convolutional neural network (CNN) to extract features from COVID-19 X-Ray images. Detection of lung cancer on chest ct images using minimum redundancy maximum relevance feature selection method with convolutional neural networks. Stage 2 has been executed in the second third of the total number of iterations when \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\). In general, MPA is a meta-heuristic technique that simulates the behavior of the prey and predator in nature37. An image segmentation approach based on fuzzy c-means and dynamic particle swarm optimization algorithm. For fair comparison, each algorithms was performed (run) 25 times to produce statistically stable results.The results are listed in Tables3 and4. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer). An efficient feature generation approach based on deep learning and feature selection techniques for traffic classification.

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